Registry ChEMBL database of bioactive drug-like small molecules - Cell lines section

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Chemistry resources

Prefix: chembl.cell
Alternative Prefixes: ChEMBL-Cells
Keywords: bioactivities cell lines
License: CC-BY-SA-3.0
Links: Homepage

Identifier Standards

Pattern for Local Unique Identifiers: Local unique identifiers in ChEMBL database of bioactive drug-like small molecules - Cell lines section should match this regular expression:
^CHEMBL\d+$
Example Local Unique Identifier: CHEMBL3307800 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from ChEMBL database of bioactive drug-like small molecules - Cell lines section should match this regular expression:
^chembl\.cell:CHEMBL\d+$
Example CURIE: chembl.cell:CHEMBL3307800
Format String for RDF URIs: http://rdf.ebi.ac.uk/resource/chembl/cell_line/$1
Example RDF URI: http://rdf.ebi.ac.uk/resource/chembl/cell_line/CHEMBL3307800

Contacts

Contact: David Mendez Lopez 0000-0002-0294-5484 nclopezo
Group Contact: Mailing List
Identifier Space Owner: European Bioinformatics Institute
Contributors: creator Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt; contributor Javier Millán Acosta 0000-0001-5608-781X jmillanacosta

Mappings to External Registries

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.

Registry Name	Registry Metaprefix	External Prefix	Curate
Cellosaurus	`cellosaurus.resource`	`ChEMBL-Cells`

Providers

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A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier CHEMBL3307800 is used to demonstrate the providers available for ChEMBL database of bioactive drug-like small molecules - Cell lines section. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name	Provider Code	URI
ChEMBL database of bioactive drug-like small molecules - Cell lines section	`chembl.cell`	https://www.ebi.ac.uk/chembl/cell_line_report_card/CHEMBL3307800
ChEMBL database of bioactive drug-like small molecules - Cell lines section (RDF)	`rdf`	http://rdf.ebi.ac.uk/resource/chembl/cell_line/CHEMBL3307800
Bioregistry	`bioregistry`	https://bioregistry.io/chembl.cell:CHEMBL3307800

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("ChEMBL-Cells")
'chembl.cell'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("chembl.cell")
{'ChEMBL-Cells'}

This name annotation was originally annotated in Cellosaurus Registry and is redistributed under the unknown license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("chembl.cell")
'ChEMBL database of bioactive drug-like small molecules - Cell lines section'

Get the license:

>>> import bioregistry as br
>>> br.get_license("chembl.cell")
'CC-BY-SA-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("chembl.cell")
'https://www.ebi.ac.uk/chembldb'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("chembl.cell")
'David Mendez Lopez'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("chembl.cell")
'dmendez@ebi.ac.uk'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("chembl.cell")
'nclopezo'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("chembl.cell")
'0000-0002-0294-5484'