Registry ChEMBL target

ChEMBL is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated from the primary scientific literature.

Prefix: chembl.target
Alternative Prefixes: ChEMBL-Targets
Keywords: cell cell line ontology protein protein complex
License: CC-BY-SA-3.0
Links: Homepage OBO OWL OBO JSON

Identifier Standards

Pattern for Local Unique Identifiers: Local unique identifiers in ChEMBL target should match this regular expression:
^CHEMBL\d+$
Example Local Unique Identifier: CHEMBL3467 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from ChEMBL target should match this regular expression:
^chembl\.target:CHEMBL\d+$
Example CURIE: chembl.target:CHEMBL3467

Contacts

Contact: David Mendez Lopez 0000-0002-0294-5484 nclopezo
Group Contact: Mailing List
Identifier Space Owner: European Bioinformatics Institute

Mappings to External Registries

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 5 mappings to external registries with 3 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
BioContext	`biocontext`	`CHEMBL.TARGET`
Cellosaurus	`cellosaurus.resource`	`ChEMBL-Targets`
Identifiers.org namespace	`miriam`	`chembl.target`
N2T	`n2t`	`chembl.target`
TogoID Ontology	`togoid`	`ChemblTarget`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier CHEMBL3467 is used to demonstrate the providers available for ChEMBL target. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name	Provider Code	URI
ChEMBL target	`chembl.target`	https://www.ebi.ac.uk/chembl/target/inspect/CHEMBL3467
Bioregistry	`bioregistry`	https://bioregistry.io/chembl.target:CHEMBL3467
Identifiers.org namespace	`miriam`	https://identifiers.org/chembl.target:CHEMBL3467
Name-to-Thing	`n2t`	https://n2t.net/chembl.target:CHEMBL3467

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("ChEMBL-Targets")
'chembl.target'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("chembl.target")
{'ChEMBL-Targets'}

This name annotation was originally annotated in Identifiers.org namespace and is redistributed under the CC-BY-4.0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("chembl.target")
'ChEMBL target'

Get the license:

>>> import bioregistry as br
>>> br.get_license("chembl.target")
'CC-BY-SA-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("chembl.target")
'https://www.ebi.ac.uk/chembldb/'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("chembl.target")
'https://w3id.org/biopragmatics/resources/chembl.target/chembl.target.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("chembl.target")
'https://w3id.org/biopragmatics/resources/chembl.target/chembl.target.owl'

Get the JSON download link:

>>> import bioregistry as br
>>> br.get_json_download("chembl.target")
'https://w3id.org/biopragmatics/resources/chembl.target/chembl.target.json'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("chembl.target")
'David Mendez Lopez'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("chembl.target")
'dmendez@ebi.ac.uk'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("chembl.target")
'nclopezo'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("chembl.target")
'0000-0002-0294-5484'