{"prefix":"utrdb","name":"UTRdb","description":"A curated database of 5' and 3' untranslated sequences of eukaryotic mRNAs. In the current update, the UTR entries are organized in a gene-centric structure to better visualize and retrieve 5' and 3'UTR variants generated by alternative initiation and termination of transcription and alternative splicing. Experimentally validated miRNA targets and conserved sequence elements are also annotated. The integration of UTRdb with genomic data has allowed the implementation of an efficient annotation system and a powerful retrieval resource for the selection and extraction of specific UTR subsets.","pattern":"^([3-5][A-Z])\\w+[^A-Z][0-9]$","uri_format":"https://utrdb.cloud.ba.infn.it/cgi-bin/utrdb/utrdb?e=$1","providers":[],"homepage":"https://utrdb.cloud.ba.infn.it/utrdb/index_107.html","owners":[{"ror":"027ynra39","name":"University of Bari Aldo Moro"}],"example":"5UTR_107_ENST00000517291.2","example_extras":[],"deprecated":false,"mappings":{"integbio":"nbdc00730","miriam":"utrdb"},"synonyms":[],"keywords":["rna","sequence"],"publications":[{"pubmed":"19880380"},{"pubmed":"15608165"},{"pubmed":"11897027"},{"pubmed":"11752330"},{"pubmed":"11591473"},{"pubmed":"10592223"}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"utrdb"}