Toxic Process Ontology
type: https://bioregistry.io/schema/#0000001
description: Elucidating the mechanism of toxicity is crucial in drug safety evaluations. TOXic Process Ontology (TXPO) systematizes a wide variety of terms involving toxicity courses and processes. The first version of TXPO focuses on liver toxicity. The TXPO contains an is-a hierarchy that is organized into three layers: the top layer contains general terms, mostly derived from the Basic Formal Ontology. The intermediate layer contains biomedical terms in OBO foundry from UBERON, Cell Ontology, NCBI Taxon, ChEBI, Gene Ontology, PATO, OGG, INOH, HINO, NCIT, DOID and Relational ontology (RO). The lower layer contains toxicological terms. In applied work, we have developed a prototype of TOXPILOT, a TOXic Process InterpretabLe knOwledge sysTem. TOXPILOT provides visualization maps of the toxic course, which facilitates capturing the comprehensive picture for understanding toxicity mechanisms. A prototype of TOXPILOT is available: https://toxpilot.nibiohn.go.jp
is part of: bioregistry
git repository: TXPO
keyword: obo
keyword: ontology
0000005: 0002066
0000006: http://purl.obolibrary.org/obo/TXPO_$1
0000008: ^\d{7}$
0000010: txpo.owl
0000012: false
0000019: Yuki Yamagata
0000024: http://purl.obolibrary.org/obo/TXPO_
0000027: TXPO_0002066
0000029: txpo