appears_in: []
contact:
  email: rutgeraldo@gmail.com
  github: rvosa
  name: Rutger Vos
  orcid: 0000-0001-9254-7318
depends_on: []
deprecated: true
description: TreeBASE is a relational database designed to manage and explore information
  on phylogenetic relationships. It includes phylogenetic trees and data matrices,
  together with information about the relevant publication, taxa, morphological and
  sequence-based characters, and published analyses. Data in TreeBASE are exposed
  to the public if they are used in a publication that is in press or published in
  a peer-reviewed scientific journal, etc.
example: TB2:S1000
example_extras: []
homepage: http://treebase.org/
keywords:
- classification
- phylogenetics
- phylogenomics
mappings:
  biocontext: TREEBASE
  fairsharing: FAIRsharing.zcn4w4
  integbio: nbdc01882
  miriam: treebase
  n2t: treebase
  prefixcommons: treebase
  re3data: r3d100010170
name: TreeBASE
namespace_in_lui: false
pattern: ^TB[1,2]?:[A-Z][a-z]?\d+$
preferred_prefix: treebase
prefix: treebase
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/treebase:$1
publications:
- doi: 10.1186/1471-2148-9-93
  pmc: PMC2685121
  pubmed: '19426482'
  title: Improved data retrieval from TreeBASE via taxonomic and linguistic data enrichment
  year: 2009
repository: https://github.com/TreeBASE/treebase/issues
synonyms: []
twitter: treebase
uri_format: http://purl.org/phylo/treebase/phylows/study/$1?format=html
