{"prefix":"trans","name":"Pathogen Transmission Ontology","description":"The Pathogen Transmission Ontology describes the transmission methods of human disease pathogens describing how a pathogen is transmitted from one host, reservoir, or source to another host. The pathogen transmission may occur either directly or indirectly and may involve animate vectors or inanimate vehicles.","pattern":"^\\d{7}$","uri_format":"http://purl.obolibrary.org/obo/TRANS_$1","rdf_uri_format":"http://purl.obolibrary.org/obo/TRANS_$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/pt:$1"}],"homepage":"https://github.com/DiseaseOntology/PathogenTransmissionOntology","repository":"https://github.com/DiseaseOntology/PathogenTransmissionOntology","contact":{"name":"Lynn Schriml","orcid":"0000-0001-8910-9851","email":"lynn.schriml@gmail.com","github":"lschriml"},"example":"0000024","example_extras":[],"license":"CC0-1.0","version":"2026-03-13","download_owl":"http://purl.obolibrary.org/obo/trans.owl","download_obo":"http://purl.obolibrary.org/obo/trans.obo","deprecated":false,"mappings":{"aberowl":"TRANS","biocontext":"TRANS","fairsharing":"FAIRsharing.jz4ea7","obofoundry":"trans","ols":"trans","ontobee":"TRANS","prefixcommons":"pt","wikidata.entity":"Q15304508"},"synonyms":[],"keywords":["biomedical science","host","infection process","obo","ontology","pathogen"],"publications":[{"pubmed":"37953304","doi":"10.1093/nar/gkad1051","title":"The DO-KB Knowledgebase: a 20-year journey developing the disease open science ecosystem","year":2023},{"pubmed":"34755882","doi":"10.1093/nar/gkab1063","pmc":"PMC8728220","title":"The Human Disease Ontology 2022 update","year":2022},{"pubmed":"19850722","doi":"10.1093/nar/gkp832","pmc":"PMC2808878","title":"GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database","year":2009}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"TRANS"}