{"prefix":"ricegap","name":"Rice Genome Annotation Project","description":"The objective of this project is to provide high quality annotation for the rice genome Oryza sativa spp japonica cv Nipponbare. All genes are annotated with functional annotation including expression data, gene ontologies, and tagged lines.","pattern":"^LOC\\_Os\\d{1,2}g\\d{5}$","uri_format":"http://rice.plantbiology.msu.edu/cgi-bin/ORF_infopage.cgi?&orf=$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/rgap:$1"}],"homepage":"https://rice.uga.edu","contact":{"name":"C. Robin Buell","orcid":"0000-0002-6727-4677","email":"Robin.Buell@uga.edu"},"example":"LOC_Os02g13300","example_extras":[],"deprecated":false,"mappings":{"biocontext":"RICEGAP","miriam":"ricegap","n2t":"ricegap","prefixcommons":"rgap"},"synonyms":["rgap"],"keywords":["dna","genome"],"publications":[{"pubmed":"39558187","doi":"10.1093/nar/gkae1061","title":"The rice genome annotation project: an updated database for mining the rice genome","year":2024},{"pubmed":"17145706","doi":"10.1093/nar/gkl976","pmc":"PMC1751532","title":"The TIGR Rice Genome Annotation Resource: improvements and new features","year":2006}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"ricegap"}