{"prefix":"ribocirc","name":"riboCIRC","description":"Identifiers represent computationally predicted and experimentally verified translatable circular RNAs (circRNAs) across six model species (human, mouse, rat, worm, fly, and zebrafish), including ribosome-associated circRNAs and their encoded peptides with systematic annotation of sequence, structure, and function.","pattern":"^(hsa|mmu|rno|cel|dme|dre)_ribocirc[A-Za-z0-9.:]+_\\d{3}$","uri_format":"http://www.ribocirc.com/rna_detail.php?circ_id=$1","providers":[],"homepage":"http://www.ribocirc.com","contact":{"name":"Zhi Xie","orcid":"0000-0002-7736-5548","email":"xiezhi@gmail.com"},"example":"hsa_ribocircSCD_001","example_extras":["cel_ribocircF54A3.3_001","dme_ribocirccdi_001","dre_ribocircim:7151449_001","mmu_ribocircCoil_001","rno_ribocircVps13b_003"],"deprecated":false,"mappings":{},"synonyms":[],"keywords":["circrna","peptides","ribosome profiling","translation"],"publications":[{"pubmed":"41118507","doi":"10.1093/nar/gkaf1022","title":"riboCIRC v2.0: an expanded resource for translatable CircRNAs","year":2025},{"pubmed":"33685493","doi":"10.1186/s13059-021-02300-7","title":"riboCIRC: a comprehensive database of translatable circRNAs","year":2021}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"contributor":{"name":"Kangho Ji","orcid":"0009-0009-3402-8013","email":"ji.kang@northeastern.edu","github":"kanghosaeyo"},"reviewer":{"name":"Benjamin M. Gyori","orcid":"0000-0001-9439-5346","email":"b.gyori@northeastern.edu","github":"bgyori"},"preferred_prefix":"ribocirc","github_request_issue":1798}