appears_in: []
contact:
  email: ikufareva@ucsd.edu
  name: Ruben Abagyan
  orcid: 0000-0001-9309-2976
depends_on: []
deprecated: false
description: Pocketome is an encyclopedia of conformational ensembles of all druggable
  binding sites that can be identified experimentally from co-crystal structures in
  the Protein Data Bank. Each Pocketome entry corresponds to a small molecule binding
  site in a protein which has been co-crystallized in complex with at least one drug-like
  small molecule, and is represented in at least two PDB entries.
example: 1433C_TOBAC_1_252
example_extras: []
homepage: http://www.pocketome.org/sfSearch.cgi?act=browseall
keywords: []
mappings:
  biocontext: POCKETOME
  miriam: pocketome
  n2t: pocketome
  pathguide: '537'
name: Pocketome
namespace_in_lui: false
pattern: ^[A-Za-z_0-9]+$
preferred_prefix: pocketome
prefix: pocketome
providers: []
publications:
- doi: 10.1093/nar/gkr825
  pmc: PMC3245087
  pubmed: '22080553'
  title: 'Pocketome: an encyclopedia of small-molecule binding sites in 4D'
  year: 2011
- doi: 10.1007/978-1-60761-274-2_11
  pmc: PMC2975493
  pubmed: '19727619'
  title: The flexible pocketome engine for structural chemogenomics
  year: 2009
synonyms: []
uri_format: http://www.pocketome.org/files/$1.html
