appears_in: []
contact:
  email: oharb@upenn.edu
  github: ramobrah
  name: Omar S. Harb
  orcid: 0000-0003-4446-6200
depends_on: []
deprecated: false
description: AmoebaDB is one of the databases that can be accessed through the EuPathDB
  (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the
  genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas
  and Trypanosoma. While each of these groups is supported by a taxon-specific database
  built upon the same infrastructure, the EuPathDB portal offers an entry point to
  all these resources, and the opportunity to leverage orthology for searches across
  genera.
example: PF11_0344
example_extras: []
homepage: http://plasmodb.org/plasmo/
keywords:
- cdna/est
- expression
- genome
- genome/gene
- health/disease
- ontology/terminology/nomenclature
- organism
- sequence
logo: https://sites.psu.edu/llinaslab/files/2020/05/plasmodb_logogif-e1590176740521.jpg
mappings:
  biocontext: PLASMODB
  go: PlasmoDB
  integbio: nbdc01783
  miriam: plasmodb
  n2t: plasmodb
  ncbi: ApiDB_PlasmoDB
  pathguide: '514'
  prefixcommons: plasmodb
  re3data: r3d100011569
name: PlasmoDB
namespace_in_lui: false
pattern: ^\w+$
preferred_prefix: plasmodb
prefix: plasmodb
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/plasmodb:$1
publications:
- doi: 10.1093/nar/gkn814
  pmc: PMC2686598
  pubmed: '18957442'
  title: 'PlasmoDB: a functional genomic database for malaria parasites'
  year: 2008
synonyms:
- ApiDB_PlasmoDB
uri_format: http://plasmodb.org/plasmo/showRecord.do?name=GeneRecordClasses.GeneRecordClass&source_id=$1
