{"prefix":"pdb-ccd","name":"Chemical Component Dictionary","description":"The Chemical Component Dictionary is as an external reference file describing all residue and small molecule components found in Protein Data Bank entries. It contains detailed chemical descriptions for standard and modified amino acids/nucleotides, small molecule ligands, and solvent molecules. Each chemical definition includes descriptions of chemical properties such as stereochemical assignments, aromatic bond assignments, idealized coordinates, chemical descriptors (SMILES & InChI), and systematic chemical names.","pattern":"^\\w{1,3}$","uri_format":"https://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/ccd:$1"}],"homepage":"https://www.ebi.ac.uk/pdbe-srv/pdbechem/","contact":{"name":"Helen Berman","orcid":"0000-0002-3337-0660","email":"berman@rcsb.rutgers.edu"},"owners":[{"ror":"02catss52","name":"European Bioinformatics Institute"}],"example":"AB0","example_extras":["A","PI"],"license":"http://www.ebi.ac.uk/Information/termsofuse.html","deprecated":false,"mappings":{"biocontext":"PDB-CCD","miriam":"pdb-ccd","n2t":"pdb-ccd","prefixcommons":"ccd","togoid":"PdbCcd"},"synonyms":["PDBeChem","pdbechem"],"keywords":["chemical","classification","compound"],"publications":[{"pubmed":"14634627","doi":"10.1038/nsb1203-980","title":"Announcing the worldwide Protein Data Bank","year":2003}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"comment":"might be same as pdb.ligand, not sure though","contributor_extras":[{"name":"Birgit Meldal","orcid":"0000-0003-4062-6158","email":"bmeldal@ebi.ac.uk","github":"bmeldal-eg"}],"has_canonical":"pdb.ligand","preferred_prefix":"pdb-ccd"}