appears_in:
- mco
contact:
  email: huang@southalabama.edu
  github: Huang-OMIT
  name: Jingshan Huang
  orcid: 0000-0003-2408-2883
depends_on: []
deprecated: false
description: The purpose of the OMIT ontology is to establish data exchange standards
  and common data elements in the microRNA (miR) domain. Biologists (cell biologists
  in particular) and bioinformaticians can make use of OMIT to leverage emerging semantic
  technologies in knowledge acquisition and discovery for more effective identification
  of important roles performed by miRs in humans' various diseases and biological
  processes (usually through miRs' respective target genes).
download_obo: https://raw.githubusercontent.com/OmniSearch/omit/master/src/ontology/omit.obo
download_owl: http://purl.obolibrary.org/obo/omit.owl
example: 0000069
example_extras: []
homepage: http://omit.cis.usouthal.edu/
keywords:
- annotation
- biology
- cell
- gene
- gene prediction
- life science
- mirna
- molecular entity
- molecular interaction
- obo
- ontology
- prediction and recognition
- protein
- regulation of gene expression
license: CC-BY-3.0
mappings:
  aberowl: OMIT
  biocontext: OMIT
  bioportal: OMIT
  fairsharing: FAIRsharing.mf91p5
  miriam: omit
  n2t: omit
  obofoundry: omit
  ols: omit
  ontobee: OMIT
  wikidata.entity: Q81661752
name: Ontology for MicroRNA Target
namespace_in_lui: false
owners:
- name: European Bioinformatics Institute
  ror: 02catss52
pattern: ^\d{7}$
preferred_prefix: OMIT
prefix: omit
providers: []
publications:
- doi: 10.1186/s13326-016-0064-2
  pmc: PMC4863347
  pubmed: '27175225'
  title: 'OmniSearch: a semantic search system based on the Ontology for MIcroRNA
    Target (OMIT) for microRNA-target gene interaction data'
  year: 2016
- doi: 10.1371/journal.pone.0100855
  pmc: PMC4099014
  pubmed: '25025130'
  title: 'OMIT: dynamic, semi-automated ontology development for the microRNA domain'
  year: 2014
- doi: 10.1007/s11095-011-0573-8
  pubmed: '21879385'
  title: 'OMIT: a domain-specific knowledge base for microRNA target prediction'
  year: 2011
rdf_uri_format: http://purl.obolibrary.org/obo/OMIT_$1
repository: https://github.com/OmniSearch/omit
synonyms:
- OMIT
uri_format: http://purl.obolibrary.org/obo/OMIT_$1
version: dev
