appears_in: []
depends_on: []
deprecated: false
description: NAPP (Nucleic Acids Phylogenetic Profiling) is a clustering method based
  on conserved noncoding RNA (ncRNA) elements in a bacterial genomes. Short intergenic
  regions from a reference genome are compared with other genomes to identify RNA
  rich clusters.
example: '351'
example_extras: []
homepage: http://rssf.i2bc.paris-saclay.fr/NAPP/index.php
keywords:
- clustering
- nucleotide
mappings:
  biocontext: NAPP
  miriam: napp
  n2t: napp
  prefixcommons: napp
name: Nucleic Acids Phylogenetic Profiling
namespace_in_lui: false
pattern: ^\d+$
preferred_prefix: napp
prefix: napp
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/napp:$1
publications:
- doi: 10.1093/nar/gkr807
  pmc: PMC3245103
  pubmed: '21984475'
  title: 'NAPP: the Nucleic Acid Phylogenetic Profile Database'
  year: 2011
- doi: 10.1101/gr.089714.108
  pmc: PMC2694484
  pubmed: '19237465'
  title: Single-pass classification of all noncoding sequences in a bacterial genome
    using phylogenetic profiles
  year: 2009
synonyms: []
uri_format: http://rssf.i2bc.paris-saclay.fr/NAPP/Niveau2.php?specie=$1
