{"prefix":"mmdb","name":"Molecular Modeling Database","description":"The Molecular Modeling Database (MMDB) is a database of experimentally determined structures obtained from the Protein Data Bank (PDB). Since structures are known for a large fraction of all protein families, structure homologs may facilitate inference of biological function, or the identification of binding or catalytic sites.","pattern":"^\\d{1,5}$","uri_format":"http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?uid=$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/mmdb:$1"}],"homepage":"http://www.ncbi.nlm.nih.gov/sites/entrez?db=structure","contact":{"name":"Siqian He","orcid":"0000-0002-1707-4167","email":"siqian.he@nih.gov"},"owners":[{"ror":"0060t0j89","name":"National Library of Medicine, Maryland"}],"example":"50885","example_extras":[],"deprecated":false,"mappings":{"biocontext":"MMDB","edam":"2667","miriam":"mmdb","n2t":"mmdb","pathguide":"508","prefixcommons":"mmdb"},"synonyms":[],"keywords":["dna","interaction","protein","small molecule","structure"],"publications":[{"pubmed":"17135201","doi":"10.1093/nar/gkl952","pmc":"PMC1751549","title":"MMDB: annotating protein sequences with Entrez's 3D-structure database","year":2006}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"mmdb"}