appears_in: []
banana: MGI
contact:
  email: joel.richardson@jax.org
  github: JoelRichardson
  name: Joel Richardson
  orcid: 0000-0003-3342-5753
depends_on: []
deprecated: false
description: The Mouse Genome Database (MGD) project includes data on gene characterization,
  nomenclature, mapping, gene homologies among mammals, sequence links, phenotypes,
  allelic variants and mutants, and strain data.
download_json: https://w3id.org/biopragmatics/resources/mgi/mgi.json.gz
download_obo: https://w3id.org/biopragmatics/resources/mgi/mgi.obo.gz
download_owl: https://w3id.org/biopragmatics/resources/mgi/mgi.owl.gz
example: '6017782'
example_extras: []
homepage: http://www.informatics.jax.org/
keywords:
- animal model
- blast
- data analysis service
- expression
- function
- gene
- gene expression
- genetics
- genome
- genome/gene
- genotype
- gold standard
- human disease
- human health
- image
- model
- molecular neuroanatomy resource
- ontology
- organism-specific databases
- orthology
- pathology
- pathway
- phenotype
- recombinase
- sequence
- single nucleotide polymorphism
- strain
- tumor
license: CC-BY-4.0
logo: https://www.informatics.jax.org/webshare/images/mgi_logo.gif
mappings:
  biocontext: MGI
  cellosaurus: MGI
  edam: '3274'
  go: MGI
  integbio: nbdc00568
  miriam: mgi
  n2t: mgi
  ncbi: MGI
  prefixcommons: mgi
  re3data: r3d100010266
  rrid: MGI
  uniprot: DB-0060
  wikidata: P671
name: Mouse Genome Informatics
namespace_in_lui: true
pattern: ^\d+$
preferred_prefix: MGI
prefix: mgi
providers:
- code: agr
  description: MGI through the Alliance of Genome Resources
  homepage: https://www.alliancegenome.org
  name: MGI through the Alliance of Genome Resources
  uri_format: https://www.alliancegenome.org/gene/MGI:$1
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/mgi:$1
- code: mgi.marker
  description: MGI Marker
  homepage: http://www.informatics.jax.org/marker
  name: MGI Marker
  uri_format: http://www.informatics.jax.org/marker/MGI:$1
publications:
- doi: 10.1126/science.8091224
  pubmed: '8091224'
  title: A database for mouse development
  year: 1994
- doi: 10.1093/genetics/iyae031
  pubmed: '38531069'
- doi: 10.1093/nar/gky1056
  pmc: PMC6323923
  pubmed: '30407599'
  title: Mouse Genome Database (MGD) 2019
  year: 2019
- doi: 10.1093/nar/gky922
  pmc: PMC6324054
  pubmed: '30335138'
  title: 'The mouse Gene Expression Database (GXD): 2019 update'
  year: 2019
- doi: 10.1093/ilar/ilx013
  pmc: PMC5886341
  pubmed: '28838066'
  title: 'Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological
    Knowledgebase for the Laboratory Mouse'
  year: 2017
- doi: 10.1007/978-1-4939-6427-7_3
  pubmed: '27933520'
  title: 'Mouse Genome Informatics (MGI): Resources for Mining Mouse Genetic, Genomic,
    and Biological Data in Support of Primary and Translational Research'
  year: 2017
- doi: 10.1093/nar/gkw1040
  pmc: PMC5210536
  pubmed: '27899570'
  title: 'Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory
    mouse'
  year: 2016
- doi: 10.1093/nar/gkt1225
  pmc: PMC3964950
  pubmed: '24285300'
  title: 'The Mouse Genome Database: integration of and access to knowledge about
    the laboratory mouse'
  year: 2013
- doi: 10.1093/nar/gks1115
  pmc: PMC3531104
  pubmed: '23175610'
  title: 'The mouse genome database: genotypes, phenotypes, and models of human disease'
  year: 2012
- doi: 10.1093/nar/gkr974
  pmc: PMC3245042
  pubmed: '22075990'
  title: 'The Mouse Genome Database (MGD): comprehensive resource for genetics and
    genomics of the laboratory mouse'
  year: 2011
- pubmed: '19274630'
- pubmed: '18428715'
- doi: 10.1093/nar/gki113
  pmc: PMC540067
  pubmed: '15608240'
  title: 'The Mouse Genome Database (MGD): from genes to mice--a community resource
    for mouse biology'
  year: 2005
synonyms:
- MGD
- MGI
uri_format: http://www.informatics.jax.org/accession/MGI:$1
