appears_in: []
contact:
  email: patricia.siguier@univ-tlse3.fr
  name: Patricia Siguier
  orcid: 0000-0003-1620-6495
depends_on: []
deprecated: true
description: ISfinder is a database of bacterial insertion sequences (IS). It assigns
  IS nomenclature and acts as a repository for ISs. Each IS is annotated with information
  such as the open reading frame DNA sequence, the sequence of the ends of the element
  and target sites, its origin and distribution together with a bibliography, where
  available.
example: ISA1083-2
example_extras: []
homepage: http://www-is.biotoul.fr/
keywords:
- dna
- gene
- sequence
- taxonomy
mappings:
  biocontext: ISFINDER
  integbio: nbdc00510
  miriam: isfinder
  n2t: isfinder
  ncbi: ISFinder
  prefixcommons: isfinder
name: Insertion sequence elements database
namespace_in_lui: false
pattern: ^IS\w+(\-\d)?$
preferred_prefix: isfinder
prefix: isfinder
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/isfinder:$1
publications:
- doi: 10.1093/nar/gkj014
  pmc: PMC1347377
  pubmed: '16381877'
  title: 'ISfinder: the reference centre for bacterial insertion sequences'
  year: 2006
synonyms: []
uri_format: https://www-is.biotoul.fr/scripts/ficheIS.php?name=$1
