{"prefix":"innatedb","name":"A Knowledge Resource for Innate Immunity Interactions and Pathways","description":"InnateDB has been developed to facilitate systems level investigations of the mammalian (human, mouse and bovine) innate immune response. Its goal is to provide a manually-curated knowledgebase of the genes, proteins, and particularly, the interactions and signaling responses involved in mammalian innate immunity. InnateDB incorporates information of the whole human, mouse and bovine interactomes by integrating interaction and pathway information from several of the major publicly available databases but aims to capture an improved coverage of the innate immunity interactome through manual curation.","uri_format":"http://www.innatedb.ca/getGeneCard.do?id=$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/innatedb:$1"}],"homepage":"http://www.innatedb.ca/","contact":{"name":"David Lynn","orcid":"0000-0003-4664-1404","email":"david.lynn@flinders.edu.au"},"example":"20021","example_extras":[],"deprecated":false,"mappings":{"fairsharing":"FAIRsharing.rb2drw","integbio":"nbdc01870","pathguide":"264","prefixcommons":"innatedb","re3data":"r3d100010676"},"synonyms":[],"keywords":["curated information","gene","genome/gene","health/disease","immunity","immunology","interaction","interaction/pathway","interactome","life science","molecular interaction","organism","pathway","protein","protein interactions","psi-mi"],"publications":[{"pubmed":"23180781","doi":"10.1093/nar/gks1147","pmc":"PMC3531080","title":"InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation","year":2012}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"reviewer":{"name":"Charles Tapley Hoyt","orcid":"0000-0003-4423-4370","email":"cthoyt@gmail.com","github":"cthoyt"},"preferred_prefix":"innatedb"}