{"prefix":"hamap","name":"High-quality Automated and Manual Annotation of microbial Proteomes","description":"HAMAP is a system that identifies and semi-automatically annotates proteins that are part of well-conserved and orthologous microbial families or subfamilies. These are used to build rules which are used to propagate annotations to member bacterial, archaeal and plastid-encoded protein entries.","pattern":"^MF_\\d+$","uri_format":"https://hamap.expasy.org/unirule/$1","providers":[{"code":"bio2rdf","name":"Bio2RDF","description":"Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers.","homepage":"https://bio2rdf.org","uri_format":"http://bio2rdf.org/hamap:$1"}],"homepage":"https://hamap.expasy.org/","owners":[{"ror":"002n09z45","name":"SIB Swiss Institute of Bioinformatics"}],"example":"MF_01400","example_extras":[],"deprecated":false,"mappings":{"biocontext":"HAMAP","edam":"2766","go":"HAMAP","miriam":"hamap","n2t":"hamap","prefixcommons":"hamap","uniprot":"DB-0041"},"synonyms":[],"keywords":["family and domain databases","protein"],"publications":[{"pubmed":"25348399","doi":"10.1093/nar/gku1002","pmc":"PMC4383873","title":"HAMAP in 2015: updates to the protein family classification and annotation system","year":2014},{"pubmed":"23193261","doi":"10.1093/nar/gks1157","pmc":"PMC3531088","title":"HAMAP in 2013, new developments in the protein family classification and annotation system","year":2012}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"hamap"}