appears_in: []
depends_on: []
deprecated: false
description: The Electron Microscopy Data Bank (EMDB) is a public repository for electron
  microscopy density maps of macromolecular complexes and subcellular structures.
  It covers a variety of techniques, including single-particle analysis, electron
  tomography, and electron (2D) crystallography. The EMDB map distribution format
  follows the CCP4 definition, which is widely recognized by software packages used
  by the structural biology community.
example: EMD-1001
example_extras: []
homepage: https://www.ebi.ac.uk/pdbe/emdb/
keywords:
- 3d structure databases
- electron microscopy
- protein
mappings:
  biocontext: EMDB
  edam: '1146'
  miriam: emdb
  n2t: emdb
  prefixcommons: emdb
  re3data: r3d100010562
  uniprot: DB-0272
name: Electron Microscopy Data Bank
namespace_in_lui: false
owners:
- name: European Bioinformatics Institute
  ror: 02catss52
pattern: ^EMD-\d{4,5}$
preferred_prefix: emdb
prefix: emdb
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/emdb:$1
publications:
- doi: 10.1093/nar/gkv1126
  pmc: PMC4702818
  pubmed: '26578576'
  title: EMDataBank unified data resource for 3DEM
  year: 2015
- doi: 10.1093/nar/gkq880
  pmc: PMC3013769
  pubmed: '20935055'
  title: 'EMDataBank.org: unified data resource for CryoEM'
  year: 2010
- doi: 10.1016/s0968-0004(02)02176-x
  pubmed: '12417136'
  title: New electron microscopy database and deposition system
  year: 2002
synonyms: []
uri_format: https://www.ebi.ac.uk/pdbe/entry/emdb/$1
