@prefix bioregistry: <https://bioregistry.io/registry/> .
@prefix bioregistry.schema: <https://bioregistry.io/schema/#> .
@prefix dcat: <http://www.w3.org/ns/dcat#> .
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix doap: <http://usefulinc.com/ns/doap#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix orcid: <https://orcid.org/> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sh: <http://www.w3.org/ns/shacl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

bioregistry:bioregistry dcterms:hasPart bioregistry:cleavageatlas .

bioregistry:cleavageatlas a sh:PrefixDeclaration,
        bioregistry.schema:0000001 ;
    rdfs:label "Cleavage Atlas" ;
    dcterms:contributor orcid:0000-0002-1044-9499 ;
    dcterms:description "The Cleavage Atlas collects proteolytic cleavage sites observed in public mass-spectrometry proteomics data (PRIDE/ProteomeXchange). Each identifier names a single peptide bond in a UniProtKB protein, independent of which protease cleaves it: the UniProtKB accession, an optional isoform number, and the P1 residue position (Schechter-Berger numbering on the full precursor sequence, Met1 = 1). The bond named is the one between residue P1 and residue P1+1."^^xsd:string ;
    dcterms:isPartOf bioregistry:bioregistry ;
    doap:maintainer orcid:0000-0002-1044-9499 ;
    dcat:keyword "mass spectrometry",
        "proteomics" ;
    sh:namespace "https://cleavageatlas.com/site/"^^xsd:anyURI ;
    sh:prefix "cleavageatlas" ;
    foaf:homepage "https://cleavageatlas.com"^^xsd:anyURI ;
    bioregistry.schema:0000005 "P01009_382"^^xsd:string ;
    bioregistry.schema:0000006 "https://cleavageatlas.com/site/$1"^^xsd:string ;
    bioregistry.schema:0000008 "^([OPQ][0-9][A-Z0-9]{3}[0-9]|[A-NR-Z][0-9]([A-Z][A-Z0-9]{2}[0-9]){1,2})(-[0-9]+)?_[1-9][0-9]*$"^^xsd:string ;
    bioregistry.schema:0000012 false ;
    bioregistry.schema:0000021 orcid:0000-0003-4423-4370 ;
    bioregistry.schema:0000027 <https://cleavageatlas.com/site/P01009_382> .

orcid:0000-0003-4423-4370 rdfs:label "Charles Tapley Hoyt" ;
    foaf:mbox "cthoyt@gmail.com" .

orcid:0000-0002-1044-9499 rdfs:label "Rens de Groot" ;
    foaf:mbox "R.deGroot@ucl.ac.uk" .

