appears_in:
- cdno
- chiro
- ecocore
- ecto
- envo
- fobi
- foodon
- genepio
- maxo
- mco
- ons
- pcl
- proco
- scdo
- uberon
- xpo
banana: CHEBI
contact:
  email: amalik@ebi.ac.uk
  github: amalik01
  name: Adnan Malik
  orcid: 0000-0001-8123-5351
contributor_extras:
- email: muhammad@ebi.ac.uk
  github: theArsalanM
  name: Muhammad Arsalan
  orcid: 0009-0005-4625-8212
depends_on:
- bfo
- ro
deprecated: false
description: Chemical Entities of Biological Interest (ChEBI) is a freely available
  dictionary of molecular entities focused on 'small' chemical compounds.
download_json: http://purl.obolibrary.org/obo/chebi.json
download_obo: http://purl.obolibrary.org/obo/chebi.obo
download_owl: http://purl.obolibrary.org/obo/chebi.owl
example: '138488'
example_extras:
- '60327'
homepage: http://www.ebi.ac.uk/chebi
keywords:
- biochemistry
- carbohydrate
- chemical
- chemical biology
- chemical compound
- chemical entity
- chemistry
- compound
- dataplant
- earth sciences
- ess
- lipid
- lipidomics
- metabolite
- metabolomics
- molecular entity
- natural product
- nfdi4cat
- nfdi4chem
- obo
- ontology
- ontology/terminology/nomenclature
- proteomics
- small molecule
- structure
- taxonomic classification
license: CC-BY-4.0
logo: https://www.ebi.ac.uk/chebi/chebi_logo.svg
mappings:
  aberowl: CHEBI
  bartoc: '558'
  biocontext: CHEBI
  biodivportal: CHEBI
  bioportal: CHEBI
  cellosaurus: ChEBI
  cheminf: '000407'
  edam: '1174'
  fairsharing: FAIRsharing.62qk8w
  go: CHEBI
  integbio: nbdc00027
  miriam: chebi
  n2t: chebi
  obofoundry: chebi
  ols: chebi
  ontobee: CHEBI
  prefixcommons: chebi
  re3data: r3d100012626
  tib: chebi
  togoid: Chebi
  wikidata: P683
  wikidata.entity: Q902623
name: Chemical Entities of Biological Interest
namespace_in_lui: true
owners:
- name: European Bioinformatics Institute
  ror: 02catss52
pattern: ^\d+$
preferred_prefix: CHEBI
prefix: chebi
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/chebi:$1
- code: chebi-img
  description: Image server from chebi
  first_party: true
  homepage: https://www.ebi.ac.uk/chebi/
  name: ChEBI
  uri_format: https://www.ebi.ac.uk/chebi/backend/api/public/compound/$1/structure/?width=300&height=300
- code: iedb.antigen
  description: A comprehensive collection of data on immune epitopes, covering experimental
    data and resources, including antigens
  example: '60327'
  homepage: https://www.iedb.org
  name: Immune Epitope Database
  uri_format: https://www.iedb.org/antigen/ChEBI:$1
publications:
- doi: 10.1093/nar/gkv1031
  pmc: PMC4702775
  pubmed: '26467479'
  title: 'ChEBI in 2016: Improved services and an expanding collection of metabolites'
  year: 2015
- doi: 10.1093/nar/gks1146
  pmc: PMC3531142
  pubmed: '23180789'
  title: 'The ChEBI reference database and ontology for biologically relevant chemistry:
    enhancements for 2013'
  year: 2012
- doi: 10.1093/nar/gkp886
  pmc: PMC2808869
  pubmed: '19854951'
  title: 'Chemical Entities of Biological Interest: an update'
  year: 2009
- doi: 10.1002/0471250953.bi1409s26
  pubmed: '19496059'
  title: 'ChEBI: an open bioinformatics and cheminformatics resource'
  year: 2009
- doi: 10.1093/nar/gkm791
  pmc: PMC2238832
  pubmed: '17932057'
  title: 'ChEBI: a database and ontology for chemical entities of biological interest'
  year: 2007
- doi: 10.1093/nar/gkaf1271
  title: 'ChEBI: re-engineered for a sustainable future'
rdf_uri_format: http://purl.obolibrary.org/obo/CHEBI_$1
references:
- https://github.com/biopragmatics/bioregistry/issues/1760
repository: https://github.com/ebi-chebi/ChEBI
synonyms:
- CHEBI
- CHEBIID
- ChEBI
uri_format: http://purl.obolibrary.org/obo/CHEBI_$1
version: '251'
