appears_in: []
contact:
  email: zaking@ucsd.edu
  github: zakandrewking
  name: Zachary King
  orcid: 0000-0003-1238-1499
depends_on: []
deprecated: false
description: BiGG is a knowledgebase of Biochemically, Genetically and Genomically
  structured genome-scale metabolic network reconstructions. It more published genome-scale
  metabolic networks into a single database with a set of stardized identifiers called
  BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites
  are linked to many external databases (KEGG, PubChem, and many more). This collection
  references model compartments.
download_json: https://w3id.org/biopragmatics/resources/bigg.compartment/bigg.compartment.json
download_obo: https://w3id.org/biopragmatics/resources/bigg.compartment/bigg.compartment.obo
download_owl: https://w3id.org/biopragmatics/resources/bigg.compartment/bigg.compartment.owl
example: c
example_extras: []
homepage: http://bigg.ucsd.edu/compartments/
keywords:
- cellular component
- compartment
- ontology
- subcellular compartment
license: http://bigg.ucsd.edu/license#license
logo: https://lh3.googleusercontent.com/proxy/vQjhtm8lVovH27pBaBSbAx_50uQbOvjubQM4s-R3-6JLiEzlozInmDfqGpp7OwbbkwxbTwfqie4g1GSGOG-vryt20uzT
mappings:
  biocontext: BIGG.COMPARTMENT
  miriam: bigg.compartment
  n2t: bigg.compartment
name: BiGG Compartment
namespace_in_lui: false
owners:
- name: University of California, San Diego
  ror: 0168r3w48
pattern: ^c|cm|cx|e|f|g|h|i|im|l|m|mm|n|p|r|s|u|um|v|w|x|y$
preferred_prefix: bigg.compartment
prefix: bigg.compartment
providers: []
publications: []
synonyms: []
uri_format: http://bigg.ucsd.edu/compartments/$1
