appears_in: []
depends_on: []
deprecated: false
description: arrayMap is a collection of pre-processed oncogenomic array data sets
  and CNA (somatic copy number aberrations) profiles. CNA are a type of mutation commonly
  found in cancer genomes. arrayMap data is assembled from public repositories and
  supplemented with additional sources, using custom curation pipelines. This information
  has been mapped to multiple editions of the reference human genome.
example: icdom:8500_3
example_extras: []
homepage: https://www.arraymap.org
keywords: []
mappings:
  biocontext: ARRAYMAP
  miriam: arraymap
  n2t: arraymap
  re3data: r3d100012630
name: ArrayMap
namespace_in_lui: false
pattern: ^[\w\-:,]{3,64}$
preferred_prefix: arraymap
prefix: arraymap
providers: []
publications:
- doi: 10.1093/nar/gkv1310
  pmc: PMC4702916
  pubmed: '26615188'
  title: 'The SIB Swiss Institute of Bioinformatics'' resources: focus on curated
    databases'
  year: 2015
- doi: 10.1093/nar/gku1123
  pmc: PMC4383937
  pubmed: '25428357'
  title: 'arrayMap 2014: an updated cancer genome resource'
  year: 2014
- doi: 10.1186/1471-2164-15-82
  pmc: PMC3909908
  pubmed: '24476156'
  title: Chromothripsis-like patterns are recurring but heterogeneously distributed
    features in a survey of 22,347 cancer genome screens
  year: 2014
- doi: 10.1371/journal.pone.0036944
  pmc: PMC3356349
  pubmed: '22629346'
  title: 'arrayMap: a reference resource for genomic copy number imbalances in human
    malignancies'
  year: 2012
synonyms: []
uri_format: https://www.arraymap.org/pgx:$1
